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R. Bruel > Blog
Blog / tutorials
Analyzing large ecological datasets with R
Random but hopefully useful bits of code to analyze large ecological datasets
On Twitter
Science
Presenting early results at SEFS 12
Believe me, the rainstorm pictured below wasn't fun to be in as a human on a bike. How do such extreme storms impact freshwater phytoplankton communities?
— Rosalie Bruel (@RosalieBruel) July 29, 2021
I am presenting preliminary results on that topic today at #SEFS12 (RS14, session starting at 11:30 CEST). @GLEONetwork pic.twitter.com/hTJYh1fzN7
Variability of response of a native species to an invasive
species revealed by long-term, spatially explicit, datasets
New paper with @dvm_uvm @EllenMarsden2 @VTFishWildlife @USFWSFisheries @SUNYPlattsburgh @UVM_RSENR published in the J. Great Lakes Res. @iaglr
— Rosalie Bruel (@RosalieBruel) May 13, 2021
Access without suscription until July 2, 2021, and ask me beyond that: https://t.co/U7v4kPcMtM
🧵 pic.twitter.com/mbmL7XJaLd
Evidence for an early regime shift in a deep lake
I needed some good news… so very pleased to share that our paper “Reframing Lake Geneva ecological trajectory in a context of multiple but asynchronous pressures” is out in JOPL https://t.co/IB1RPROJki
— Rosalie Bruel (@RosalieBruel) January 29, 2021
I am so excited by the framework of this study and the methods we used. 🧵 pic.twitter.com/VCI7hM1nXc
serac, an R package for you short-lived radionuclides
age-depth models needs
Our paper describing our R package serac is out! serac provides a fast and reproducible way to compute the most popular age depth models based on 210Pb measurements.
— Rosalie Bruel (@RosalieBruel) October 24, 2020
Download for free before Dec. 13 using this link: https://t.co/2l2ePvs937#rstats #serac
Sub-sampling strategie for time-series
We reckon there are more important news this week, but here is our paper, online today in Ecological Indicators! Offering food for thoughts on sampling design when the objective is to detect change points in ecological time series. https://t.co/1DVO7q9lWt
— Rosalie Bruel (@RosalieBruel) November 6, 2020
cc @eastonrwhite pic.twitter.com/CZvdK9alLh
GLEON20, Student workshop, Rottnest Island, Western
Australia
Kicking off the #GLEON20 Student Association workshop with @MEL_Phytos and Sami Khan. @RosalieBruel giving an excellent introduction to @github @GLEONetwork pic.twitter.com/XDD9uX9OFk
— Jonathan Doubek (@jondoubek) December 3, 2018
QUAPAL18 - presenting our work on Lake Geneva
1 #QUAPAL18
— Rosalie Bruel (@RosalieBruel) June 13, 2018
Assessing ecosystems resistance to air temperature warming requires long periods of times. Regarding the multiplicity of stressors in the Anthropocene, can we use past responses to climate as an analogue for future evolution of ecosystems? pic.twitter.com/cn2kcPfak4
My first paper!
Our paper “Seeking alternative stable states in a deep lake” published in #Freshwater #Biology is now available in Early Views! You can read it from here: https://t.co/tJJb6X8rqE. 👇Thread on what we did👇, please RT! @MEPerga @UMRCARRTEL pic.twitter.com/4TyoyfVrsY
— Rosalie Bruel (@RosalieBruel) March 1, 2018
Life at the lab
About paper (co)authorhip ✍️
This morning during @EllenMarsden2 and @dvm_uvm lab meeting, we discussed authorship in scientific papers. There's a lot of unspoken codes that can seem a bit obscure when you enter academia at first. The following thread gathers things I remember from the discussion #phdchat 1/
— Rosalie Bruel (@RosalieBruel) 21 mars 2019
Helping Ben Block (UVM-RESL Graduate student)
Went this morning with some folks from @UVM_RSENR to try out the ice jigger @BentheEcologist will use to catch fish and study their diets over the winter.
— Rosalie Bruel (@RosalieBruel) January 16, 2019
Clever adaptations of the equipment and thick ice were involved. pic.twitter.com/410wyi49ra
Helping Natalie Flores (UVM-RESL Graduate student)
This morning, Kerry (an undergrad student) and I woke up early to go help @NatalieMFlo on the field, at Shelburne Pond, VT. pic.twitter.com/YlK6ukOHkZ
— Rosalie Bruel (@RosalieBruel) September 9, 2018
Public outreach
Host for @LaBioauLabo during one
week
[admin] Bonjour à tous ! Cette semaine c’est @RosalieBruel, doctorante @Inra_France @Univ_Savoie @UmrCarrtel qui sera avec nous.
— La Bio au Labo (@laBioauLabo) April 2, 2018
Retrouvez sa bio sur le sitehttps://t.co/qG5GkBcFqf… pic.twitter.com/pfMXpAzRiK